Module: biospecimens

Module Contents

lcl-prod
- 1.CENTER_NO (*PK)
- 2.PERSON_ID
- 3.LCL_CID (*PK)
- 4.LCL_PROD_TYPE
- 5.LCL_TYPE_REM
- 6.LCL_DISCARDED
- 7.LCL_MYCOPLASMA
- 8.LCL_RECOVERY
- 9.GENERATION
- 10.LCL_CID_SOURCE
- 11.BLOOD_PROD_CID
- 12.IS_DISPATCHABLE
- 13.LOCATION
- 14.LCL_COUNT
- 15.LCL_COUNT_REM
- 16.DATE_FROZEN

CENTER_NO (*PK)

number (2,0)

Required:true

Center Identification Number. *CENTER_NO + LCL_CID are the primary key for the table.

Allowable Values
11	Sinai Health Systems (formerly Cancer Care Ontario)
12	University of Southern California Consortium (USCC)
13	University of Melbourne
14	University of Hawaii Cancer Center
15	Mayo Clinic
16	Fred Hutch, Seattle
17	University of California at San Francisco (UCSF) (formerly CPIC, originally Northern California (NCCC))

2	PERSON_ID	string (12)	Required:true
	Number that uniquely identifies an individual.

3	LCL_CID (*PK)	string (17)	Required:true
	Identifier used internally by centers for a Lymphoblast cell line transformation or expansion. *CENTER_NO + LCL_CID are the primary key for the table.

LCL_PROD_TYPE

number (1,0)

Required:true

Total type of frozen aliquots made during this transformation or expansion.

Allowable Values
1	LCL_FREEZE single
2	LCL_FREEZE set
3	LCL_cell_Pellet single
4	LCL_cell_pellet set

LCL_TYPE_REM

number (1,0)

Required:false

Type of frozen aliquots currently remaining that were made during this transformation or expansion.

Allowable Values
1	LCL_FREEZE single
2	LCL_FREEZE set
3	LCL_cell_Pellet single
4	LCL_cell_pellet set

LCL_DISCARDED

number (1,0)

Required:true

Indicates whether the materials from this Lymphoblast cell line transformation or expansion was discarded.

Allowable Values
1	Yes
2	No

LCL_MYCOPLASMA

number (1,0)

Required:true

Results of mycoplasma testing against this Lymphoblast cell line transformation or expansion.

Allowable Values
1	Positive (Mycoplasma tested and was present)
2	Negative (Mycoplasma tested and was not present)
9	Not tested

LCL_RECOVERY

number (1,0)

Required:true

Results of Lymphoblast cell line freeze recovery test.

Allowable Values
1	Pass/O.K
2	Fail/Not O.K
9	Not tested

GENERATION

number (1,0)

Required:true

Generation or passage of culture.

Allowable Values
1	Generation 1: Initial transformed cell line
2	Generation 2: Line made from Generation 1 LCL
3	Generation 3: Line made from Generation 2 LCL
4	Generation 4: Line made from Generation 3 LCL

LCL_CID_SOURCE

string (11)

Required:false

LCL_CID of the sample used to expand cell lines

BLOOD_PROD_CID

string (16)

Required:false

Identifier used internally by centers for a product from a blood draw.

IS_DISPATCHABLE

number (1,0)

Required:true

Indicates whether the center is willing to dispatch the material to external investigators.

Allowable Values
1	Yes
2	No

LOCATION

number (1,0)

Required:true

Storage site for a specimen.

Allowable Values
1	Center
2	CORIELL
3	SAIC
4	Multiple Sites
9	Unknown/lost

14	LCL_COUNT	number (4,0)	Required:false
	Total number of aliquots made during this transformation or expansion.

LCL_COUNT_REM

number (4,0)

Required:false

Number of aliquots remaining from this transformation or expansion.

DATE_FROZEN

string (8)

Required:false

Date the LCL was frozen. Format: YYYYMMDD.

Date Value Check
The date must follow to the following format: Format YYYYMMDD. Must consist of valid date. Components of date should be right justified and zero filled. MM = 01 – 12, 88, 99 DD = 01 – 31, 88, 99 YYYY = Minimum year – system date year, 8888, 9999 Use 88, 8888 for not currently known, in progress to obtain information. Use 99, 9999 for not known. If century is known, but year is unknown then give an estimate of year or code YYYY = 9999. If MM = 99 then DD must = 99. If century is known, but year is unknown then give an estimate of year or code YYYY = 9999. If YYYY = 9999 then MM and DD must = 99. The following special parameters are used:
1980	Minimum year